Issues

• No intron detection due to overlapping features

  williamritchie/IRFinder#195 · Filter by author M-corre opened on Apr 20, 2026

• IR Differential Analysis using IRFinder 2.0 not giving output

  williamritchie/IRFinder#194 · Filter by author sachidhakal opened on Feb 5, 2025
  1

• Problems with the output file in IRFinder

  williamritchie/IRFinder#193 · Filter by author liugang20220612 opened on Jan 10, 2025

• The meaning of the col names in IRFinder_IR_dir.txt

  williamritchie/IRFinder#192 · Filter by author LongYuan0529 opened on Nov 27, 2024

• which model to run

  williamritchie/IRFinder#191 · Filter by author adi8897 opened on Nov 14, 2024

• Missing genes in IRFinder-IR

  williamritchie/IRFinder#190 · Filter by author Nathan-Lecouvreur opened on Aug 29, 2024
  1

• Problems when building the Reference(T2T-genome)

  williamritchie/IRFinder#189 · Filter by author MG-DYM opened on Jul 4, 2024
  1

• Minimum Number of RNA-seq reads

  williamritchie/IRFinder#188 · Filter by author cinnamon6 opened on Apr 27, 2024
  2

• refrence genome

  williamritchie/IRFinder#187 · Filter by author adi8897 opened on Apr 19, 2024
  4

• Issue with Reference Building Process in IRFinder

  williamritchie/IRFinder#186 · Filter by author inagaki-s opened on Mar 31, 2024
  2

• results of Generalized Linear Model with Replicates

  williamritchie/IRFinder#185 · Filter by author adi8897 opened on Mar 24, 2024
  4

• building IR-finder REF

  williamritchie/IRFinder#183 · Filter by author adi8897 opened on Mar 11, 2024
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• error in trim

  williamritchie/IRFinder#180 · Filter by author wittney-m opened on Mar 1, 2024
  3

• Perl Error when building Ref

  williamritchie/IRFinder#179 · Filter by author liscruk opened on Feb 21, 2024
  2

• problem with running IR finder

  williamritchie/IRFinder#177 · Filter by author adi8897 opened on Jan 16, 2024
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• Spliced and Unspliced Reads Information

  williamritchie/IRFinder#176 · Filter by author cinnamon6 opened on Jan 9, 2024
  2

• The differential IR location information from IRFinder output and ENSEMBLE database doesn't match.

  williamritchie/IRFinder#174 · Filter by author CYcodeworld opened on Sep 13, 2023
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• differential IR analysis

  williamritchie/IRFinder#173 · Filter by author Ananya1006 opened on Aug 21, 2023
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• Building reference

  williamritchie/IRFinder#172 · Filter by author pillailab opened on May 23, 2023
  2

• Do the input fastq files have the same number of lines?

  williamritchie/IRFinder#170 · Filter by author 44314474 opened on Apr 10, 2023
  2

• Error: Type checker found wrong number of fields while tokenizing data line (while building reference)

  williamritchie/IRFinder#167 · Filter by author sheilazuniga opened on Oct 28, 2022
  5

• IRFinder for scRNA-seq data

  williamritchie/IRFinder#166 · Filter by author me37uday opened on Oct 18, 2022
  11

• Failed reference Building

  williamritchie/IRFinder#164 · Filter by author akhats opened on Jun 8, 2022
  3

• Fastq file error

  williamritchie/IRFinder#162 · Filter by author ericabrophy opened on May 20, 2022
  4

• IRFinder on total RNAseq libraries

  williamritchie/IRFinder#161 · Filter by author ojziff opened on Apr 18, 2022
  1