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Jun 26, 2025 - M4
#
masurca
Here are 5 public repositories matching this topic...
De novo genome assembly (MaSuRCA), reference-guided scaffolding (RagTag), and QC (QUAST, BUSCO, synteny analysis) for Humulus lupulus cv. Julian Gold
bioinformatics hpc scaffolding synteny genome-assembly pbs masurca quast plant-genomics ragtag humulus-lupulus
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Aug 18, 2026 - Shell
reproducible Snakemake pipeline for bacterial hybrid assembly.
python snakemake nanopore illumina genome-assembly masurca snakemake-workflow hybrid-assembly quast polca snakemake-pipeline flye bacterial-genomics filtlong
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Jun 30, 2026 - Python
Pipeline bioinformático modular para ensamblaje, evaluación y anotación de genomas bacterianos mediante herramientas reproducibles basadas en Conda.
bash bioinformatics genomics conda bioinformatics-pipeline genome-annotation genome-assembly masurca busco quast bacterial-genome-analysis bacterial-genomics bakta bacterial-assembly
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Aug 11, 2026 - Shell
Automated Bash pipeline for hybrid de novo bacterial genome assembly, combining Oxford Nanopore (ONT) and Illumina reads with QC, polishing (POLCA), and evaluation (QUAST).
bash bioinformatics pipeline illumina genome-assembly masurca nanopore-sequencing hybrid-assembly quast flye bacterial-genomics bash-pipeline filtlong
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Jun 30, 2026 - Shell
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