Algorithmic and Utility Extensions for the Imaris Program
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Aug 28, 2026 - Python
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imaris
Here are 14 public repositories matching this topic...
Prometheus exporter providing metrics from a Reprise License Manager (RLM) instance.
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Sep 20, 2024 - HTML
Github repository for imaging analysis in python + Imaris
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Feb 24, 2019 - Python
Neural network tools for automated cell contouring, fluorescent signal detection, and 3D distance measurements in Imaris microscopy scans, with human review and editing
python deep-learning neural-networks image-analysis signal-detection cell-segmentation 3d-imaging imaris fluorescence-microscopy
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Oct 30, 2026 - Python
Tracking cell and count mRNA inside each cell
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Apr 26, 2022 - Jupyter Notebook
Python XT script for exporting .swc from .ims in IMARIS
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Dec 5, 2025 - Python
Converting your ImageXpress tiff files to the imaris file format with stitching and intensity correction
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Jul 31, 2026 - Python
Desktop microscopy workflow using Cellpose, guided landmarks, exposure calibration, channel and region selection, and inclusion or exclusion ROIs to count cells and write center points and display settings to Imaris-compatible files.
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Sep 16, 2026 - Python
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Mar 20, 2024 - C#
A personal Windows tool for simple batch adjustment and export of IMS, OIB, and TIFF microscopy images.
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Aug 31, 2026 - Python
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Mar 21, 2019 - Jupyter Notebook
Create and manipulate digital skeletons
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Dec 1, 2017 - MATLAB
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