hemodynamics

HemoCell is a high-performance suspension code for simulating blood flows developed by the Computational Science Lab at the University of Amsterdam.

A high performance parallel lattice-Boltzmann code for large scale fluid flow in complex geometries

PyHRF is a set of tools to analyze fMRI data and specifically study hemodynamics.

Tools for representation, morphologic characterization, and hemodynamics analysis of flow in saccular aneurysms

Non-intrusive reduced-order modeling with geometry-informed snapshots. Current based registration is applied to compute the diffeomorphism between snapshots.

Finite volume-based monotone code for blood flow hemodynamics simulations!

Detecting elevated hemodynamics from the 12-lead ECG alone

Reservoir analysis for Sphygmocor files

Reservoir analysis for BPplus files

In partnership with Emory School of Medicine, providing a user-friendly interface to calculate hemodynamic values for the ICU.

Masters thesis: A lumped parameter model and solver for simulating blood flow.

WillisWorks is a conceptual teaching tool for exploring how arterial anatomy, pressure, resistance, collateral pathways, venous outflow, oxygen exchange, and metabolic demand interact.

Modular MATLAB toolbox for fNIRS analysis: import, preprocessing, hemoglobin conversion, QC, block/GLM modeling, group statistics (LME), connectivity & hyperscanning, and 3D visualization / diffuse optical tomography.

MATLAB code for cardiovascular system simulation, including 0D heart models, 1D pulse wave blood-flow models, and coupled 0D-1D outlet boundary models.

NeuroSolve is the open-source implementation of NeuroCFD

End-to-end fNIRS BCI pipeline — decodes mental states (REST/MENTAL/MOTOR) from hemodynamic signals using ICA, CBSI, and classical ML classifiers

HRfunc is a python preprocessing and modeling tool for estimating neural activity from hemoglobin concentration through modeling hemodynamic response functions in fNIRS signals and deconvolving neural activity. Toeplitz deconvolution with Tikhonov regularization is employed for HRF and neural activity estimation.

Closed-loop cardiovascular model (0D, 8 compartments) with digital twin layer for mitral regurgitation. Predicts invasive hemodynamics from noninvasive echo inputs.