gene-tree

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wQFM implementation in Java

python java bioinformatics perl phylogenetics bash-script dendropy species-tree phylonet gene-tree weighted-quartets

Set of scripts to process HybSeq target enrichment HTS data (on computing grids).

split-based gene tree–species tree reconciliation for robust branch mapping under missing taxa

Datasets and scripts for "Species tree branch length estimation despite incomplete lineage sorting, duplication, and loss" paper

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