xduan7 / bioseq-learning Star 6 Code Issues Pull requests deep learning experiments on biological sequences with PyTorch bioinformatics deep-learning genome pytorch protein-sequences unsupervised-learning biological-sequences nucleotides gene-sequences Updated Mar 16, 2021 Python
code-cse / Splice-DNA-Gene Star 3 Code Issues Pull requests Splice-Gene-Prediction, Healthcare, Medical-science, DNA genetics dna healthcare classification dna-sequences gene-sequences Updated May 29, 2020 Python
igemmcmaster / genome-transformer Star 3 Code Issues Pull requests Pretrained efficient transformers on genomes -- WIP attention gene-sequences nucleotide-embeddings Updated Feb 19, 2021 Python
cmkumar87 / FM_Index Star 1 Code Issues Pull requests A C++ library for fm index wrote to index compressed gene sequence files. bioinformatics decompression gene-sequences Updated Jul 2, 2017 C++
AftabHussain / gene-subseq-analysis Star 0 Code Issues Pull requests Machine learning framework using subsequence-based features to study gene family relationships. svm gene-sequences subarrays Updated May 1, 2025 Python
Kok-Herng / gene-palindromes-finder Star 0 Code Issues Pull requests A program to find gene palindromes, including inverted repeats bioinformatics palindrome gene-sequences reverse-complement inverted-repeats spacer-region Updated Aug 2, 2022 Python
ifremer-bioinformatics / BLAST-PLAST-bench Star 0 Code Issues Pull requests Scripts to run benchmarks of BLAST and PLAST on a supercomputer supercomputer protein-sequences blast-searches blastn plast blastx blastp megablast gene-sequences Updated Jan 30, 2018 Shell