extracellular-matrix

An R package for ECM molecule annotation, classification, and analysis

Python library designed for tissue microenvironment spatial analysis

Heterogeneous hydrogel modulus estimation for 3D traction force microscopy

MatriCom: matrisome communications in single-cell RNA-seq datasets

Quantifying the dynamics of long-range cell-cell mechanical communication paper code

Applying MatriCom to analyze scRNA-Seq datasets and infer ECM communication networks

Wing Ying Chow (Warwick, UK) lab website. Using magnetic resonance to deliver new insight to human health and disease.

Sample and data relationship format (SDRF) metadata files of ECM proteomics studies from the Naba lab

De novo cosmetic peptide design from the skin ECM degradome, scored against composition-preserving nulls

Analysis code and reference outputs for a multi-cohort study of T2, interferon, and repair-ECM programs in childhood asthma.

Snakemake workflow for DESeq2 differential expression, functional enrichment and matrisome annotation of paediatric tumour RNA-seq against normal brain.