conservation-genetics

Do Dominant Silverbacks monopolize all reproduction? Microsatellite Paternity & Kinship Analysis in Mountain Gorillas. CERVUS LOD scoring, Queller-Goodnight relatedness, Nonacs B-index. Python

R package for ancestry probability surfaces and spatial genetic decision support

My first DNA barcoding project - Philippine Eagle, Barn Owl, and Sumatran Rhinoceros

An analysis of genetic diversity representation in botanic gardens of a rare oak species and a rare cycad species

This repository is a supplementary information repository from García-Merchán et al... 2020 publication.

Snakemake workflow for population structure and genetic diversity from a filtered SNP VCF: ancestry inference, population assignment, ROH/F_ROH, pi, and callable-site-aware statistics from GVCFs. Downstream companion to snpArcher.

Data processing, model fitting, and analysis code for the hierarchical DNA methylation model developed by Murgas et al. (2021)

Analysis code for Paris et al. 2024 iScience: ddRAD assessment of hybridization between Podarcis raffonei and invasive P. siculus on Vulcano (Aeolian Islands)

A Docker repository for a course on analysis of genomic data

Analysis scripts and supporting files for the population genomic study of an endangered microendemic oak.