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Pipeline to run SCENIC analysis (pySCENIC)

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Name		Name	Last commit message	Last commit date
R		R
pipeline_pyscenic		pipeline_pyscenic
pipeline_pyscenic_downstream		pipeline_pyscenic_downstream
pipeline_pyscenic_r		pipeline_pyscenic_r
python		python
README.md		README.md
pipeline_pyscenic.py		pipeline_pyscenic.py
pipeline_pyscenic_downstream.py		pipeline_pyscenic_downstream.py
pipeline_pyscenic_r.py		pipeline_pyscenic_r.py
pyscenic_python_environment.yml		pyscenic_python_environment.yml
pyscenic_r_environment.yml		pyscenic_r_environment.yml

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Pipeline to run SCENIC analysis (pySCENIC)

Authors: Lucy Garner and Devika Agarwal

Three pipelines that should be run in the order:

pipeline_pyscenic.py
pipeline_pyscenic_downstream.py
pipeline_pyscenic_r.py

About

Pipeline to run SCENIC analysis (pySCENIC)

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1 star

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