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Update AWS Megatest Launch Action - #4518

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FriederikeHanssen wants to merge 5 commits into
nf-core:devfrom
FriederikeHanssen:update-action

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@FriederikeHanssen

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Closes: https://github.com/nf-core/ops/issues/218 and https://github.com/nf-core/ops/issues/233

PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

@FriederikeHanssen
FriederikeHanssen changed the base branch from main to dev October 15, 2026 10:02
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codecov Bot commented Oct 15, 2026 •

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.57%. Comparing base (fc17087) to head (02d4de7).
⚠️ Report is 33 commits behind head on dev.

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Comment thread nf_core/pipeline-template/.github/workflows/awsfulltest.yml Outdated
@edmundmiller edmundmiller changed the title Update action Update AWS Megatest Launch Action Oct 15, 2026
@FriederikeHanssen

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there you go

@mashehu mashehu left a comment

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can you test this on testpipeline if we get a real ron

Comment thread nf_core/pipeline-template/.github/workflows/awsfulltest.yml Outdated
- name: Launch workflow via Seqera Platform
uses: seqeralabs/action-tower-launch@v2
- name: Launch workflow via Seqera Platform {%- raw %}
uses: seqeralabs/action-seqera-launch@f7b1a39afc8bb65f58b84150cd214b33fe416fef #v1

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Suggested change
uses: seqeralabs/action-seqera-launch@f7b1a39afc8bb65f58b84150cd214b33fe416fef #v1
uses: seqeralabs/action-seqera-launch@v1

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shouldn't we be using the git sha for security purposes

Comment thread nf_core/pipeline-template/.github/workflows/awstest.yml Outdated
FriederikeHanssen and others added 2 commits October 16, 2026 15:26
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
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can you test this on testpipeline if we get a real ron

tested on both airrflow and sarek:

https://cloud.seqera.io/orgs/nf-core/workspaces/AWSmegatests/watch/3CMVUJcuTiIvic/tasks & nf-core/airrflow#519
https://cloud.seqera.io/orgs/nf-core/workspaces/AWSmegatests/watch/33FfaqQwef6StR/tasks & nf-core/sarek#2321

to cover v1 and v2 parser

@mashehu mashehu added this to the 4.3.0 milestone Oct 16, 2026

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2 participants