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Wrong tree inferred (clearly not parsimonious) despite being in short-branch-length regime

Status: Open.

#46 In iqtree/cmaple;

· corneliusroemer opened on Mar 28, 2025

Multifurcation option --out-mul-tree doesn't seem to work

Status: Open.

#45 In iqtree/cmaple;

· corneliusroemer opened on Mar 28, 2025

Windows support

enhancementNew feature or requestNew feature or request

Status: Open.

#42 In iqtree/cmaple;

· bqminh opened on Feb 7, 2025

Checkpointing request

enhancementNew feature or requestNew feature or request

Status: Open.

#41 In iqtree/cmaple;

· bqminh opened on Feb 6, 2025

Follow GNU CLI conventions for options: e.g. accept -T=4 and -T4 not just -T 4

Status: Open.

#35 In iqtree/cmaple;

· corneliusroemer opened on Jul 18, 2024

Include epidemiological models (SIR)

Status: Open.

#20 In iqtree/cmaple;

· trongnhanuit opened on Jan 31, 2023