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@friendsofstrandseq

friendsofstrandseq

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  1. mosaicatcher-pipeline mosaicatcher-pipeline Public

    Integrated workflow for SV calling from single-cell Strand-seq data

    Jupyter Notebook 26 12

  2. ashleys-qc-pipeline ashleys-qc-pipeline Public archive

    Strand-Seq Quality Control Pipeline based on ashleys-qc

    Jupyter Notebook 4 2

Repositories

Showing 10 of 14 repositories
  • mosaicatcher-pipeline Public

    Integrated workflow for SV calling from single-cell Strand-seq data

    friendsofstrandseq/mosaicatcher-pipeline's past year of commit activity
    Jupyter Notebook 26 MIT 12 2 2 Updated Aug 31, 2026
  • mosaicatcher-testdata Public
    friendsofstrandseq/mosaicatcher-testdata's past year of commit activity
    0 0 0 0 Updated Apr 27, 2026
  • mosaicatcher-docs Public
    friendsofstrandseq/mosaicatcher-docs's past year of commit activity
    0 0 0 0 Updated Mar 23, 2026
  • mosaicatcher-referencedata Public
    friendsofstrandseq/mosaicatcher-referencedata's past year of commit activity
    0 0 0 0 Updated Feb 5, 2026
  • snakemake-profiles Public

    Snakemake profiles

    friendsofstrandseq/snakemake-profiles's past year of commit activity
    Shell 0 1 0 0 Updated Feb 4, 2026
  • ashleys-qc-pipeline Public archive

    Strand-Seq Quality Control Pipeline based on ashleys-qc

    friendsofstrandseq/ashleys-qc-pipeline's past year of commit activity
    Jupyter Notebook 4 MIT 2 0 4 Updated Jul 9, 2025
  • genecore-mosaicatcher Public
    friendsofstrandseq/genecore-mosaicatcher's past year of commit activity
    0 0 0 0 Updated Oct 24, 2022
  • ashleys-qc Public

    Automated Selection of High quality Libraries for the Extensive analYsis of Strandseq data (ASHLEYS)

    friendsofstrandseq/ashleys-qc's past year of commit activity
    Python 1 MIT 2 2 1 Updated Oct 20, 2022
  • mosaicatcher Public

    Processing of raw Strand-seq data as part of the SV calling pipeline

    friendsofstrandseq/mosaicatcher's past year of commit activity
    C++ 4 MIT 6 4 0 Updated Jul 6, 2022
  • strandsequtils Public

    A random collection of scripts around strand-seq data

    friendsofstrandseq/strandsequtils's past year of commit activity
    R 2 1 0 1 Updated Nov 30, 2021
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