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@cobilab

Computational Biology Laboratory

Computational Biology Laboratory at the University of Aveiro

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  1. cryfa cryfa Public

    A secure encryption tool for genomic data

    C++ 64 17

  2. geco3 geco3 Public

    An efficient DNA sequence compressor using Neural Networks

    C 16 9

  3. jarvis3 jarvis3 Public

    Efficient compression of biological data

    C 7

  4. altair altair Public

    AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

    C 11 1

  5. alcor alcor Public

    Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data

    C 11 2

  6. FALCON2 FALCON2 Public

    A tool to infer metagenomic sample composition

    C 5

Repositories

Showing 10 of 41 repositories
  • OptJV3 Public

    A C thread-parallel genetic algorithm optimizer for discovering high-performing JARVIS3 compression parameter sets

    cobilab/OptJV3's past year of commit activity
    C 1 GPL-3.0 0 0 0 Updated Sep 18, 2026
  • alcor Public

    Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data

    cobilab/alcor's past year of commit activity
    C 11 GPL-3.0 2 0 0 Updated Sep 3, 2026
  • amito Public

    Ancient Mitogenomes Letter

    cobilab/amito's past year of commit activity
    Shell 0 GPL-3.0 0 0 0 Updated Jul 29, 2026
  • cryfa Public

    A secure encryption tool for genomic data

    C++ 64 GPL-3.0 17 0 0 Updated May 3, 2026
  • FALCON2 Public

    A tool to infer metagenomic sample composition

    cobilab/FALCON2's past year of commit activity
    C 5 GPL-3.0 0 0 0 Updated Apr 15, 2026
  • jarvis3 Public

    Efficient compression of biological data

    cobilab/jarvis3's past year of commit activity
    C 7 GPL-3.0 0 0 0 Updated Mar 14, 2026
  • GeAnno Public

    Automatic Annotation of Plant Gene Regions with Machine Learning

    cobilab/GeAnno's past year of commit activity
    Jupyter Notebook 2 MIT 1 0 0 Updated Mar 4, 2026
  • altair Public

    AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

    cobilab/altair's past year of commit activity
    C 11 GPL-3.0 1 1 0 Updated Mar 4, 2026
  • OAWK Public
    cobilab/OAWK's past year of commit activity
    Shell 1 GPL-3.0 0 0 0 Updated Feb 19, 2026
  • GenomeClass Public

    Classification and Analysis of genomes using Explainable Machine Learning

    cobilab/GenomeClass's past year of commit activity
    C 1 GPL-3.0 0 0 0 Updated Feb 18, 2026

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