Issues

• flags: Low confidence should be ignored when determining stabilization

  c2-d2/rase#27 · Filter by author karel-brinda opened on May 13, 2019

• Little non-reproducibility in case of ambiguities

  bug
  c2-d2/rase#23 · Filter by author karel-brinda opened on Apr 29, 2019

• rase_predict should fail when a wrong tree is used

  c2-d2/rase#22 · Filter by author karel-brinda opened on Apr 4, 2019

• RASE doesn't work when only 1 phylogroup exists

  c2-d2/rase#21 · Filter by author karel-brinda opened on Apr 4, 2019

• Add set -o pipefail the main rase program

  c2-d2/rase#20 · Filter by author karel-brinda opened on Apr 1, 2019

• plot_timeline: Dont plot stabilization legend if flags are not present

  enhancement
  c2-d2/rase#18 · Filter by author karel-brinda opened on Feb 27, 2019

• PermissionError: [Errno 13] Permission denied: '/Users/karel/miniconda/lib/python3.6/site-packages/rase/rase_predict.py'

  bug
  c2-d2/rase#17 · Filter by author karel-brinda opened on Feb 27, 2019

• OSError: [Errno 5] Input/output error

  bug
  c2-d2/rase#16 · Filter by author karel-brinda opened on Feb 25, 2019

• Add cores, etc. to local rules

  c2-d2/rase#13 · Filter by author karel-brinda opened on Feb 21, 2019

• Plot timeline: add support for other units (kbps)

  c2-d2/rase#9 · Filter by author karel-brinda opened on Feb 19, 2019

• Predict - sampling: add support for other units (kbps, etc)

  c2-d2/rase#8 · Filter by author karel-brinda opened on Feb 19, 2019

• Predict: Final snapshot line is missing from the sampled output

  bug
  c2-d2/rase#7 · Filter by author karel-brinda opened on Feb 19, 2019

• Pipeline - add subcommands

  feature-request
  c2-d2/rase#6 · Filter by author karel-brinda opened on Feb 19, 2019

• Permission denied rase_predict.py

  bug
  c2-d2/rase#3 · Filter by author karel-brinda opened on Feb 7, 2019