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biorack

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magi magi Public

Quickly find and score consensus between metabolite identifications and gene annotations

Python 19 2
metatlas metatlas Public

Metabolite Atlas Main Repository

Python 16 11
simile simile Public

Jupyter Notebook 17 2
blink blink Public

Jupyter Notebook 13 6
envnet envnet Public

Jupyter Notebook 5
chemecho chemecho Public

Embedding and featurization of metabolite structures and spectra

Jupyter Notebook 6

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Showing 10 of 25 repositories

lil-agent Public
Run self-contained study packages through an AI agent on Berkeley Lab-hosted open-weight models, with a network allowlist and sandbox.

biorack/lil-agent's past year of commit activity

Python 0 MIT 0 0 0 Updated Nov 6, 2026
metatlas-data Public
Data files for metabolite atlas generation

biorack/metatlas-data's past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Nov 5, 2026
metatlas Public
Metabolite Atlas Main Repository

biorack/metatlas's past year of commit activity

Python 16 BSD-3-Clause 11 6 10 Updated Oct 27, 2026
SpectraCodec Public

biorack/SpectraCodec's past year of commit activity

Python 1 0 0 0 Updated Sep 17, 2026
envnet_gnps2 Public

biorack/envnet_gnps2's past year of commit activity

Python 3 0 0 0 Updated May 28, 2026
envnet Public

biorack/envnet's past year of commit activity

Jupyter Notebook 5 0 0 0 Updated May 28, 2026
infrastructure_automation Public

biorack/infrastructure_automation's past year of commit activity

Shell 0 0 0 0 Updated Feb 25, 2026
growth_rate Public

biorack/growth_rate's past year of commit activity

Python 0 0 0 0 Updated Feb 12, 2026
magi Public
Quickly find and score consensus between metabolite identifications and gene annotations

biorack/magi's past year of commit activity

Python 19 2 20 0 Updated Nov 10, 2025
labkey_deploy Public
Instructions and Docker setup for running our LIMS

biorack/labkey_deploy's past year of commit activity

Shell 0 3 0 0 Updated Sep 30, 2025

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