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Zyreniee/README.md

Yusuf Güneş

Scientific Computing | Modern C++ | Vulkan | Biomedical Research


About

I build performance-oriented software at the intersection of systems programming, graphics, scientific computing, and biomedical research.

My work focuses on:

  • Modern C++ and low-level systems architecture
  • Vulkan / GPU-oriented computation
  • High-performance numerical and scientific simulation
  • Biomedical data analysis and computational physiology
  • Computer vision and real-time inference pipelines

I am particularly interested in problems where software architecture, numerical modeling, and real-world scientific questions meet.


Current Research & Projects

Cardiac Electrophysiology & Mechanobiology

Developing an in-silico research framework for studying mechanical perturbation of cardiac re-entry dynamics in heterogeneous tissue.

Current work includes:

  • OpenCARP-based electrophysiology experiments
  • Scar-mediated / anatomically anchored re-entry
  • Mechano-electrical feedback
  • Mechanosensitive ion-current models
  • Rotor / re-entry termination analysis
  • Calcium-dynamics and electrophysiological safety constraints
  • Custom C++ simulation infrastructure for future large-scale experiments

The long-term goal is to investigate whether targeted, non-destructive mechanical stimulation can disrupt pathological re-entry without relying on conventional high-energy electrical shocks.


High-Performance C++ / Graphics

Building low-level software with:

  • C++20
  • Vulkan
  • OpenGL
  • GLSL
  • CMake / Ninja
  • Linux
  • multithreading
  • memory-conscious architecture
  • numerical optimization
  • GPU-oriented workflows

I also maintain and develop PyEngine, a custom C++ / Vulkan engine focused on low-level rendering architecture and performance.


Biomedical AI & Computer Vision

Research and engineering work involving:

  • Python / PyTorch
  • OpenCV
  • real-time computer vision
  • physiological signal processing
  • clinical datasets and biomedical data
  • C++ acceleration of Python-heavy workloads

Current projects include research-oriented biomedical simulation, physiological signal analysis, and real-time vision systems.


Technical Stack

Languages

Graphics & Compute

Scientific & AI

Systems & Tooling


Selected Work

scar-mef-vf

Computational cardiac electrophysiology and mechano-electric feedback research.

Focus: re-entry dynamics, heterogeneous tissue, mechanosensitive currents, numerical simulation.

aerodmg

Real-time aircraft damage detection pipeline designed around C++20, TensorRT, ONNX and NVIDIA Jetson-class deployment.

Focus: computer vision, inference optimization, edge AI, GPU pipelines.

PyEngine

Custom C++ / Vulkan engine built from scratch.

Focus: rendering architecture, GPU resource management, shaders, multithreaded command generation, and low-level performance.


Open Source

I like building software from the lowest practical layer and documenting what I learn.

Current open-source work includes:

  • Vulkan / OpenGL learning resources
  • graphics programming experiments
  • C++ systems projects
  • scientific simulation tooling
  • performance-oriented utilities

Research Philosophy

Build the model. Challenge the assumptions. Measure the failure. Optimize only after the mechanism survives.


GitHub Activity


Building at the intersection of software, computation, and biology.

Pinned Loading

  1. VulkanTutorials VulkanTutorials Public

    Vulkan tutorials for beginners.

    C++ 2

  2. OpenGL-Tutorials OpenGL-Tutorials Public

    OpenGL tutorials for beginners

    C 1

  3. VOR-rPPG VOR-rPPG Public

    VOR: A Variance-Optimized multi-modal Framework for Robust Remote Photoplethysmography.

    C++ 3

  4. PyEngine PyEngine Public

    A lightweight, high-performance 3D engine built from scratch with C++20 & Vulkan, featuring embedded Python scripting.

    C++ 2