Issues

• Fix github release in release pipeline

  WaymentSteeleLab/arnie#60 · Filter by author luxaritas opened on Dec 13, 2025

• Env-based configuration is not properly functional

  WaymentSteeleLab/arnie#59 · Filter by author luxaritas opened on Dec 13, 2025

• Support importing utils without configuring packages

  WaymentSteeleLab/arnie#58 · Filter by author luxaritas opened on Dec 13, 2025

• Improve tempfile hadling

  WaymentSteeleLab/arnie#57 · Filter by author luxaritas opened on Dec 13, 2025

• Errors are often swallowed when calling external packages

  WaymentSteeleLab/arnie#56 · Filter by author luxaritas opened on Dec 13, 2025

• Documentation missing

  WaymentSteeleLab/arnie#53 · Filter by author ijmcf opened on Oct 29, 2025
  2

• Add Eternafold and LinearPartition to supported packages

  WaymentSteeleLab/arnie#47 · Filter by author ShamamaMuhitQB opened on Nov 11, 2024
  3

• Return energies for MFE predictions

  WaymentSteeleLab/arnie#45 · Filter by author mhorlacher opened on Oct 30, 2024

• Predictors separation into bpp, mfe, mea, pk - restructuring

  WaymentSteeleLab/arnie#28 · Filter by author rkretsch opened on Jun 16, 2023

• Structure representation

  WaymentSteeleLab/arnie#27 · Filter by author rkretsch opened on Jun 16, 2023

• PK branch + documentation

  WaymentSteeleLab/arnie#24 · Filter by author rkretsch opened on Jun 16, 2023
  1

  

• Documentation for sherlock

  WaymentSteeleLab/arnie#23 · Filter by author rkretsch opened on Jun 16, 2023
  2

• Orphaned functions in utils

  WaymentSteeleLab/arnie#22 · Filter by author rkretsch opened on Jun 16, 2023

• hotknots path setting

  WaymentSteeleLab/arnie#21 · Filter by author rhiju opened on Apr 21, 2023