NYU-Molecular-Pathology

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1. LG-PACT LG-PACT Public

   NYU Langone Genome PACT (Genome Profiling of Actionable Cancer Targets) targeted exome sequencing analysis pipeline.

   Python 8 2

2. NGS580-nf NGS580-nf Public

   Target exome sequencing analysis for NYU NGS580 gene panel

   Nextflow 10 5

3. demux-nf demux-nf Public

   Nextflow pipeline for Illumina NGS demultiplexing

   Nextflow 4 2

4. Methylation Methylation Public

   DNA methylation for tumor subclassifications by methylation array.

   R 3 1

5. heme-reporter heme-reporter Public

   Clinical reporting application for Oncomine Myeloid assay results.

   HTML 1 1

6. onco-reporter onco-reporter Public

   Oncomine solid tumor reporting application

   HTML 1