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BGI-FlexLab

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  1. SOAPnuke SOAPnuke Public

    A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files

    C++ 116 28

  2. SOAPTyping SOAPTyping Public

    HLA typing for Sanger Based Test

    C++ 20 7

  3. SOAPMetaS SOAPMetaS Public

    Java 8 1

  4. SOAPgaea SOAPgaea Public

    Java 4 9

  5. vcfstats vcfstats Public

    BGI-lowpass imputation vcf stats

    Java 3 1

  6. bwa-streaming bwa-streaming Public

    support hadoop streaming

    C 2 1

Repositories

Showing 10 of 16 repositories
  • automation Public

    用于自动生成WDL

    BGI-flexlab/automation's past year of commit activity
    Java 0 1 0 2 Updated Jul 12, 2025
  • SOAPgaea Public
    BGI-flexlab/SOAPgaea's past year of commit activity
    Java 4 GPL-3.0 9 4 4 Updated Jul 12, 2025
  • cromwell Public Forked from broadinstitute/cromwell

    Workflow Execution Engine using WDL

    BGI-flexlab/cromwell's past year of commit activity
    Scala 0 BSD-3-Clause 391 0 1 Updated Aug 21, 2024
  • SOAPnuke Public

    A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files

    BGI-flexlab/SOAPnuke's past year of commit activity
    C++ 116 GPL-3.0 28 12 3 Updated Mar 28, 2024
  • SOAPMetaS Public
    BGI-flexlab/SOAPMetaS's past year of commit activity
    Java 8 GPL-3.0 1 0 3 Updated Apr 21, 2023
  • SOAPTyping Public

    HLA typing for Sanger Based Test

    BGI-flexlab/SOAPTyping's past year of commit activity
    C++ 20 GPL-3.0 7 4 0 Updated Apr 7, 2023
  • bamqc Public

    BGI-lowpass bam quality control

    BGI-flexlab/bamqc's past year of commit activity
    Java 2 0 0 0 Updated Aug 11, 2021
  • vcf-pl-merge Public

    lowpass 合并bcftools和gatk结果

    BGI-flexlab/vcf-pl-merge's past year of commit activity
    C 0 0 0 0 Updated Jan 4, 2021
  • vcfstats Public

    BGI-lowpass imputation vcf stats

    BGI-flexlab/vcfstats's past year of commit activity
    Java 3 1 0 0 Updated Dec 1, 2020
  • composer Public Forked from rabix/composer

    Visual and code editor for Common Workflow Language

    BGI-flexlab/composer's past year of commit activity
    TypeScript 1 Apache-2.0 71 5 0 Updated Oct 16, 2019
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