A collection of applied AI/ML, GenAI/Agents, and statistics experiments, organized by subject into self-contained folders, each with its own README explaining the project, how it works, and how to run it. Most projects are in Python; one (the MCP server) is in TypeScript, chosen because that's the ecosystem its tooling targets.
| Folder | Topic | Projects |
|---|---|---|
ai-agent-tool-calling/ |
AI Agents | ReAct-style agent loop with tool calling (calculator, time, knowledge lookup) |
rag-pipeline-chroma/ |
Retrieval-Augmented Generation | Chunking, local embeddings, ChromaDB vector search, grounded LLM answers |
mcp-server-toolkit/ |
Model Context Protocol (TypeScript) | A from-scratch MCP server exposing statistics, A/B testing, and glossary tools |
experiment-design-ab-testing/ |
A/B Testing & Experimentation | Significance over time (video), segmented conditions, 50/50 convergence |
teacher-student-distillation/ |
Teacher-Student Model Distillation | Professor/student distillation pipeline, BERT-tokenized variant, schema diagram |
deepseek-r1-lora-finetuning/ |
LLM Fine-Tuning | DeepSeek-R1 LoRA/QLoRA fine-tuning on a medical reasoning dataset |
central-limit-theorem-sampling/ |
Statistical Inference | Central Limit Theorem demo on real EPA air quality data |
music-taste-recommender/ |
Recommender Systems | Content-based music recommender simulation |
temporal-lobe-epilepsy-intermittency/ |
Computational Neuroscience (C) | Code for Epilepsy & Behavior 2023: IAIN connectivity, intermittent synchronization, optogenetic control |
short-term-plasticity-analytical-solution/ |
Computational Neuroscience (C) | Code for Chaos, Solitons & Fractals 2024: closed-form analytical solution to short-term synaptic plasticity |
seasonal-infectious-disease-chaos/ |
Epidemiology (C) | Code for Chaos, Solitons & Fractals 2023: bistable chaotic/periodic dynamics in a seasonally forced SEIRS model |
Each folder's README explains the purpose, methodology, and requirements for every script inside it.
A few other published-paper codebases were originally hosted at henon.if.usp.br/OscilControlData and now live in their own dedicated repositories:
Chimera-and-Plasticity— AIP Advances 2022, chimera states induced by STDPSynaptic_potentiation_dependence— EPJ Special Topics, synaptic potentiation dependence on spike variabilitySTDP_Delay— Chaos, Solitons & Fractals 2023, plastic networks with transmission delays